Princess Sirindhorn IT Foundation Craniofacial Center, Chiang Mai University
Vivatchai Kaveeta
วิวัฒน์ชัย กาวีต๊ะ
PhD candidate working on machine learning for incomplete medical data
— and, before that, on the craniofacial systems that showed me why incompleteness is the
binding constraint: surgical planning, virtual-reality training, and the records that follow
a cleft lip and palate patient through eighteen years of staged care.
Role Researcher and doctoral candidate · lead investigator and first author on my own research programme · no commercial affiliation or sponsorResearch Computer Engineer & Researcher, Princess Sirindhorn IT Foundation Craniofacial Center — a nonprofit foundation centre applying information technology to healthcareCentre Member, DAkSH Research Center (Data Analytics and Knowledge Synthesis for Healthcare), Faculty of Engineering, Chiang Mai UniversityDoctoral PhD Candidate, Data Science, since 2023 · Dept. of Computer Engineering, Faculty of Engineering, Chiang Mai UniversityFocus Missing data · hypergraph learning · honest evaluation of clinical MLEmail vivatchai.k@cmu.ac.thLocation Chiang Mai, Thailand
Signal & structure Clinical systems Incomplete data (PhD, ongoing)
first author co-author clinical trial manuscript in preparationClick any mark to jump to the paper
Affiliations & research standing
Where this research is done
Every part of this work is carried out in a non-commercial setting: a
nonprofit foundation centre that treats patients, a public
university department where I am a doctoral candidate, and a university research
centre whose remit is data analytics for healthcare. I hold no industry
affiliation, and none of the research below has a commercial sponsor.
Princess Sirindhorn IT Foundation Craniofacial Center
Computer Engineer and Researcher · lead investigator on the centre’s data-science work
A nonprofit centre operating under the Princess Sirindhorn
Information Technology Foundation — a Thai royal-initiative foundation
established to apply information technology for public benefit — hosted by
Chiang Mai University. The centre provides care for patients with cleft lip,
cleft palate and craniofacial conditions, following each patient across many
years and many staged operations. I build and study the data systems behind that
care: surgical planning, virtual-reality training, inter-hospital record
linkage, and the longitudinal records themselves.
DAkSH Research Center — Data Analytics and Knowledge Synthesis for Healthcare
Member
A Chiang Mai University research centre in the university’s
Digital & AI research consortium, based in the Faculty of
Engineering and directed by Assoc. Prof. Dr. Juggapong Natwichai. Its declared
themes are engineering and technology alongside the medical and health sciences,
and its programme spans explainable “white-box” AI, large language
models over medical text, data preparation, and analytics for epidemic detection
and frailty in older adults — the same ground my doctoral work sits on.
Department of Computer Engineering, Faculty of Engineering, Chiang Mai University
PhD Candidate, Data Science · since 2023
Chiang Mai University is a public, state-funded research university and one of
Thailand’s national research universities. My doctoral programme is the
three-manuscript arc described below, which I lead: I set the questions, built
the pipelines, ran the experiments and wrote the papers.
I began in pattern recognition on hard, low-resource signals — emotional
speech, symbolic analogy — then spent six years building clinical systems at a national
craniofacial centre: surgical planning, virtual-reality training, crowdsourced case data,
inter-hospital referral.
Cleft lip and palate care is an unusually demanding setting. Treatment runs
eighteen years or more across surgery, orthodontics and speech therapy;
patients are dispersed across rural provinces; and records are fragmented between
institutions that never designed their systems to talk. Working there, the same obstacle
appeared behind every modelling problem, and it was never the model.
The data was incomplete, and the incompleteness was not random.
A laboratory value is missing because a clinician did not order the test, and that
decision is related to the patient's condition. Deletion and imputation both assume the
missingness carries no information. In clinical data that assumption is often false. My
PhD work takes this seriously as its own object of study: how much is actually
recoverable from the pattern of what is missing, and — a question the field mostly skips —
how would we know if the answer were no?
Thread 01
Signal & structure
2013 — 2016 · 2 first-author papers
Learning representations where the training signal is scarce or the structure is
symbolic rather than statistical. Emotional speech recognition via acoustic models
of decomposed component words (CMU); neural solving of analogical equations over
strings of symbols, at Waseda University under Prof. Yves Lepage.
Thread 02
Clinical systems
2019 — 2022 · 6 papers, 1 clinical trial
Computer-aided surgical planning, virtual-reality simulation for surgeon training,
healthcare crowdsourcing platforms, and inter-hospital patient referral — developed
and evaluated with the surgical team at the Princess Sirindhorn IT Foundation
Craniofacial Center.
Thread 03 · Active
Learning from incomplete data
2023 — present · PhD research, in progress · 1 published paper, 3 manuscripts
Whether the structure of missingness in clinical data can be learned from directly,
rather than imputed away — and how much is there to learn in the first place. The work
runs from a published study showing that imputation choice alone swings downstream
accuracy by up to 21 points, through a hypergraph representation built over missingness
patterns, to an oracle upper bound that asks what any method of this family could
achieve at best. Evaluated on the PLCO Cancer Screening Trial cohorts,
MIMIC-III, and eleven public datasets with native missing values.
Collaborator on this thread: Prompong Sugunnasil.
Manuscripts in preparation · 2026
Is the missingness worth modelling?
Three linked manuscripts, each taking a different run at that question: one builds a
method, one measures the ceiling any method of its family could reach, and one asks the
same thing of data split across institutions. Results are held back until submission —
what follows is the question and the design.
Paper 1Manuscript
Hypergraph-Based Machine Learning for Robust Handling of Missing Data
Each variable is a vertex; each observed missingness pattern is a hyperedge weighted by
the records it contains. Because patterns form a hierarchy under set containment, they
can borrow strength from one another — answering the pattern-submodel
literature's problem of rare patterns having too few samples to estimate, without
falling back to a complete-case model. A hierarchical shrinkage estimator with a single
parameter, selected without reference to test data.
Each observed missingness pattern becomes one hyperedge over the variables it records, weighted by how many
records carry it. Because patterns nest under set containment, the model for a rare pattern such as {A,B}
is shrunk toward the models of every pattern that contains it — borrowing their records instead of falling
back to a complete-case model.
Four PLCO cohorts + 11 public datasets · permuted-mask control · two label-leakage exclusion rules ·
manuscript on OpenReview
Paper 2Manuscript
The Ceiling of Learning on the Missingness Hypergraph
The pattern-submodel literature is evaluated by beating baselines, which establishes
that one estimator beats another — not that the family is worth pursuing at all. This
paper addresses the second question by deriving an oracle upper bound:
the gain available to a procedure allowed to select its shrinkage with hindsight on the
test fold. No selection rule can exceed it. It then diagnoses why simulation studies
report otherwise, since the standard construction for simulating pattern heterogeneity
draws the outcome from the differing coefficients and so guarantees predictiveness by
design — coefficient heterogeneity is not predictive heterogeneity.
The same oracle — shrinkage strength chosen with hindsight on the test fold, so no selection rule can
exceed it — is run twice: on the real data, and on fifty copies whose missingness masks are permuted
across records, preserving the pattern set and every support while destroying only the link between
pattern and outcome. The distance between the real ceiling and the null band is all the structure any
method of this family could ever exploit.
11 real tabular datasets · null of 50 independent mask permutations · a bound no method can beat
Paper 3Manuscript
From Binary Gating to Continuous Shrinkage: A Decision-Level Evaluation of Federated Data Merging
A hospital holding its own records can be offered a federation and must decide whether to
join. The literature treats this as binary and hunts for the threshold. This paper changes
the unit of analysis from the collection to the decision — one target
site, a set of partners, a merge rule, scored on the target's held-out rows — which across
nine collections yields 986,254 distinct merge decisions. It contributes
no new estimator: it contributes the unit of analysis, an evaluation that separates skill
from hindsight, a released harness, and a register of
415 pre-registered predictions.
The unit of analysis is one decision: a target site, a set of partners, and a merge rule, all scored on the
target's own held-out rows. A binary gate can only join or stay out; a continuous rule shrinks the merged
model toward the local one by a weight chosen on held-out local data. Repeated over nine collections this
yields 986,254 decisions, each of which the same rows judge.
9 collections · 986,254 merge decisions · six proposed explanations, six refuted — two by their own pre-registered conditions
Selected work
Three results worth reading first
2019Clinical trial
Computer-aided design for pre-operative alveolar bone grafting
A CAD workflow for planning alveolar bone grafts in cleft lip and palate patients,
taken beyond simulation into a clinical trial with real surgical cases.
Translational work of this kind is rare in applied computing: the method had to
survive contact with an operating theatre, a surgical team, and patient outcomes,
not merely a held-out test set.
Conventionally the alveolar cleft, its volume and the surrounding teeth and root tips are measured in the operating room. The trial inserted two steps before surgery — a mobile CT scan, then computer-aided design in which plastic surgeons and engineers measured and planned together — so the graft is planned before the patient is opened. Evaluated on cleft lip and palate patients.
EIDWT 2019 · Springer, Cham · pp. 482–491 · second author
2016First author
Solving analogical equations between strings of symbols using neural networks
Neural models for analogical reasoning over symbolic strings — A is to B as C is
to what? — completed at Waseda University under the MEXT scholarship with
Prof. Yves Lepage. The question it asks, whether a learned model can perform
structured symbolic transfer rather than surface pattern matching, has only become
more central since.
An analogical equation A : B :: C : D is solved without ever operating on characters directly. The three known strings are encoded as two fixed-size alignment matrices, a neural network constrained by the formal properties of analogy predicts two output matrices, and a string decoder recovers D. The design learns quickly and beats the baseline algorithm's accuracy.
ICCBR Workshops 2016 · pp. 67–76
2021First author
Requirements and technical design for an online patient referral system
System design for moving craniofacial patients between hospitals without losing
their history. The engineering problem is unglamorous and the clinical stakes are
high: a child with a cleft palate needs coordinated care from multiple specialists
over almost two decades, and referral is where that continuity usually breaks.
In Thailand a referred patient traditionally carries printed medical records to the next hospital. The proposed service moves the record electronically — but the hospitals run different EMR systems and answer to different ministries, each with its own data-protection and transfer policy, so the design's real work is mapping records and satisfying both regimes while keeping the transfer correct, complete and secure.
EIDWT 2021 · Springer International Publishing · pp. 313–323
Peer-reviewed publications
Complete record
Nine peer-reviewed papers, 2013–2023. 22 citations, h-index 3
(Google Scholar, retrieved 2 September 2026). Three further manuscripts are
in preparation.
2023
Exploration of Neural Network Imputation Methods for Medical Datasets
Kaveeta, V., Sugunnasil, P., Natwichai, J.
International Conference on Emerging Internetworking, Data & Web Technologies (EIDWT 2023), pp. 441–450. Springer. · doi:10.1007/978-3-031-26281-4_46
First author
MechanismThe pipeline is held fixed and only the imputer changes: twelve methods — seven statistical, five neural — each fill the training rows, the same classifier is fitted, and the test rows are filled by that same fitted imputer. Across four public prostate-cancer cohorts the choice of imputer alone moves prediction accuracy from 72% to 94%, which is the finding the doctoral work grew out of: the imputation step is not a neutral preprocessing detail.
2022
Collaborative Virtual Environments for Jaw Surgery Simulation
Khwanngern, K., Natwichai, J., Kaveeta, V., Meenert, P., Sriyong, S.
Advances in Networked-Based Information Systems: 24th International Conference on Network-Based Information Systems (NBiS-2021), pp. 179–187. Springer International Publishing. · doi:10.1007/978-3-030-84913-9_16
MechanismEvaluation of the earlier jaw-surgery simulator found its limit as a training tool: the trainer stood outside the headset and could only talk, and surgical technique does not transfer by voice. The follow-up surveys collaborative features and moves the trainer into the same virtual operating room, where technique can be shown rather than described.
2021
Requirements and Technical Design for Online Patient Referral System
Kaveeta, V., Suwiwattana, S., Natwichai, J., Khwanngern, K.
Advances in Internet, Data and Web Technologies: 9th International Conference on Emerging Internet, Data & Web Technologies (EIDWT-2021), pp. 313–323. Springer International Publishing. · doi:10.1007/978-3-030-70639-5_29
First author
MechanismIn Thailand a referred patient traditionally carries printed medical records to the next hospital. The proposed service moves the record electronically — but the hospitals run different EMR systems and answer to different ministries, each with its own data-protection and transfer policy, so the design's real work is mapping records and satisfying both regimes while keeping the transfer correct, complete and secure.
2020
Challenges of Crowdsourcing Platform: Thai Healthcare Information Case Study
Khwanngern, K., Natwichai, J., Kaveeta, V., Nantawad, P., Changkai, S., Suwiwattana, S.
International Conference on P2P, Parallel, Grid, Cloud and Internet Computing (3PGCIC), pp. 126–135. Springer, Cham. · cited by 1 · doi:10.1007/978-3-030-61105-7_13
MechanismTwo live platforms are examined against the structure of Thai healthcare: a mobile app linking village health volunteers with local hospitals, and an online information platform for craniofacial deformities. Each stops at its own user base, leaving an information gap between tiers. The paper analyses what keeps contributors engaged and proposes module extensions that carry information and process across that gap.
2019
Jaw surgery simulation in virtual reality for medical training
Khwanngern, K., Tiangtae, N., Natwichai, J., Kattiyanet, A., Kaveeta, V., Sitthikham, S., Kammabut, K.
International Conference on Network-Based Information Systems (NBiS), pp. 475–483. Springer, Cham. · cited by 8 · doi:10.1007/978-3-030-29029-0_45
MechanismLower-jaw cutting is central to craniofacial surgery yet rare enough that students may never perform it. The system loads a patient-derived skull model into a realistic virtual operating room where motion controllers grip, cut, drill, join and compare. The optimal cutting path is drawn on the model and progress is scored as a percentage, so the trainee gets the feedback that books and videos cannot give.
2019
Crowdsourcing platform for healthcare: cleft lip and cleft palate case studies
Khwanngern, K., Natwichai, J., Sitthikham, S., Sitthikamtiub, W., Kaveeta, V., Rakchittapoke, A., Martkamjan, S.
International Conference on Network-Based Information Systems (NBiS), pp. 465–474. Springer, Cham. · cited by 4 · doi:10.1007/978-3-030-29029-0_44
MechanismThe existing medical cloud and the community volunteers' app serve different healthcare levels, with separate user groups on separate devices, and cannot see each other's data. The proposed design is a bridge between them: crowdsourced reports flow up and follow-up requests flow down, so new cleft patients are found and existing ones tracked, at significantly less time, cost and workload for everyone contributing.
2019
Clinical Trial on Computer-Aided Design in Pre-operative Alveolar Bone Grafting in Cleft Lip-Cleft Palate Patient
Khwanngern, K., Kaveeta, V., Sitthikham, S., Sitthikamtiub, W., Changkai, S., Namwong, T.
International Conference on Emerging Internetworking, Data & Web Technologies (EIDWT), pp. 482–491. Springer, Cham. · doi:10.1007/978-3-030-12839-5_45
Clinical trial
MechanismConventionally the alveolar cleft, its volume and the surrounding teeth and root tips are measured in the operating room. The trial inserted two steps before surgery — a mobile CT scan, then computer-aided design in which plastic surgeons and engineers measured and planned together — so the graft is planned before the patient is opened. Evaluated on cleft lip and palate patients.
2016
Solving Analogical Equations Between Strings of Symbols Using Neural Networks
Kaveeta, V., Lepage, Y.
ICCBR Workshops, pp. 67–76. · cited by 8
First author
MechanismAn analogical equation A : B :: C : D is solved without ever operating on characters directly. The three known strings are encoded as two fixed-size alignment matrices, a neural network constrained by the formal properties of analogy predicts two output matrices, and a string decoder recovers D. The design learns quickly and beats the baseline algorithm's accuracy.
2013
Emotional Speech Recognition Using Acoustic Models of Decomposed Component Words
Kaveeta, V., Patanukhom, K.
2013 2nd IAPR Asian Conference on Pattern Recognition (ACPR), pp. 115–119. IEEE. · cited by 1 · doi:10.1109/acpr.2013.13
First author
MechanismRather than classify a whole utterance, the method decomposes speech into component words, groups them into segments, and fits an acoustic model per segment from audio power, MFCCs, log attack time, spectrum spread and duration. The segments' predicted emotions form a sequence; an emotion profile extracted from that sequence is the feature the final classifier reads. Trained and tested on eight IEMOCAP emotion classes.
Education & training
Academic record
2023 – present
PhD Candidate, Data Science
Department of Computer Engineering, Faculty of Engineering, Chiang Mai University. Thesis work on machine learning from incomplete medical data: hypergraph representations over missingness patterns, oracle bounds on what pattern-conditioning can gain, and the federated case.
2015 – 2017
Graduate study, Computer Engineering
Waseda University, Japan — on the Monbukagakusho (MEXT) Scholarship, the Japanese government's competitive award for international graduate students. Research on neural approaches to analogical reasoning with Prof. Yves Lepage.
2013 – 2015
Master of Engineering, Computer Engineering
Chiang Mai University, Thailand.
2009 – 2012
Bachelor of Engineering, Computer Engineering
Faculty of Engineering, Chiang Mai University, Thailand. Graduated with first-class honours on a full tuition scholarship.
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name
Vivatchai Kaveeta
name_thai
วิวัฒน์ชัย กาวีต๊ะ
role
Computer Engineer, Researcher
doctoral_status
PhD Candidate, Data Science, since 2023; Dept. of Computer Engineering, Faculty of Engineering, Chiang Mai University
institution
Chiang Mai University, Thailand
research_unit
Princess Sirindhorn IT Foundation Craniofacial Center